Additional Resources
Below are some additional resources that users may find useful to supplement the information presented during the course.
Lecture slides
Evomics-workshops, Cesky Krumlov, Czech Republic, 22 May - 4 June 2022 (course page)
Evomics-workshops, Cesky Krumlov, Czech Republic, 5-18 January 2020 (course page)
Physalia-courses, Freie Universität Berlin, Germany, 8-12 April 2019 (course page)
- Module 0 Lecture - Instructor introductions
- Module 1 Lecture - Introduction to genomic data visualization and interpretation
- Module 2 Lecture - R and ggplot
- Module 3 Lecture - GenVisR
- Module 4 Lecture - Expression
- Module 5 Lecture - Annotation
- Module 6 Lecture - Review
Evomics-workshops, Cesky Krumlov, Czech Republic, 6-19 January 2019 (course page)
Physalia-courses, Freie Universität Berlin, Germany, 11-15 September 2017 (course page)
- Module 0 Lecture - Instructor introductions
- Module 1 Lecture - Introduction to genomic data visualization and interpretation
- Module 2 Lecture - R and ggplot
- Module 3 Lecture - GenVisR
- Module 4 Lecture - Expression
- Module 5 Lecture - Annotation
- Module 6 Lecture - Review
Other Educational Resources for Topics Covered
Genome Browsing and Visualization - IGV
Genome Browsing and Visualization - UCSC Genome Browser
Introduction to R
Color selection
Introduction to ggplot2
Introduction to GenVisR
Visualization examples and general resources
- Data Viz Catalogue
- R Shiny Gallery
- R Graph Gallery
- R Graph Gallery - ggplot
- mkweb - visualization resources by Martin Krzywinski
Differential Expresion with DEseq2
Pathway Analysis, Visualization
Clinical Variant Interpretations
- Coming soon